Table 1: Novel candidate stem cell regulatory molecules

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BLAST

Table 1: Novel candidate stem cell regulatory molecules

Cell surface

LL6in11084	Cadherin family member, related to Drosophila Fat	Motifs, Alignment
B46	Cancer associated surface antigen RCAS1
LL6in21904	EGF-like repeat family; related to MEGF6
LL6in10792	FLJ13063, 2-3 TM domains and 3 Armadillo/beta-catenin-like repeats	Motifs
LL6in20800	FLJ22293, Immunoglobulin superfamily and Fibronectin domain containing	Motifs
LL6in12229	KIAA0657, Immunoglobulin superfamily	Motifs, Alignment
LL6in10039	Laminin EGF-repeat protein	Alignment, Motifs, TMPred
LL6in10980	Scavenger receptor superfamily	Motifs
LL6in11670	Xenopus homologue; novel MAM domain-containing adhesion molecule	Motifs

Secreted molecules

LL6in10471	EGF-like repeat family; homology to secreted hamster HT protein	Motifs
E25	Homologue of Xenopus Kielin	Motifs
LL6in20116	Hypothetical human protein DKFZp434P1750.1, contains signal peptide	Motifs
LL6in11145	Hypothetical protein FLJ10579; signal peptide	Motifs
LL6in12391	KIAA1402 protein; contains fringe-like motif	Motifs, Alignment
LL6in12065	Leucine-rich repeat family, some homology to Slits	Motifs
LL6in12362	p37NB, slit-like	Motifs, Alignment
LL6in21519	Putative secreted protein ZSIG37	Motifs
LL6in10388	SRPUL; sushi-repeat protein; complement control protein upregulated in leukemia	Motifs

Extracellular matrix and matrix remodelling

LL6in10447	Collagen family	Motifs
LL6in10451	Zinc-metalloproteinase family	Motifs
LL6in11087	Serine protease inhibitor/serine carboxypeptidase family	Motifs
LL6in10953	Cystatin domain family	Motifs
LL6in11258	Thrombospondin family	Motifs
LL6in12280	Cysteine protease family, with somatomedin B domain repeats	Motifs
LL6in11839	Cysteine protease family, with OTU-like (ovarian tumor Drosophila) motif	Motifs

Cytoskeleton

LL6in10041	Misato; Drosophila tubulin ancestor	TMPred
LL6in10129	KELCH domain-containing protein	Motifs
LL6in10410	Copine family
LL6in10510	Ankyrin repeat containing protein family	Motifs
LL6in10637	Ankyrin repeat containing protein family	Motifs
LL6in10723	Guanine nucleotide exchange factor family; pleckstrin homology domain	Motifs
LL6in10884	F-actin binding protein; calponin homology domain	Motifs
LL6in11075	KIAA0793; band 4.1 family member	Motifs
LL6in11104	Gelsolin family of actin-binding protein, villin like	Motifs
LL6in11109	DJ466N1.4 novel human protein, similar to ankyrin 3	Motifs

Protein Modification

LL6in10110	N-acetylgalactosaminyltransferase family	Motifs, Alignment
LL6in12320	Sulfotransferase-family
LL6in20432	Galactosyltransferase family	Motifs
LL6in20531	Deubiquitinating enzyme family	Motifs
LL6in20661	"Glycosyl transferase family, related to NAGT4"